Light Microscopy Technology Platform of Bielefeld University
Upright confocal laser scanning microscope (W1)
Upright stand FLIM (frequency domain)
Lambert LIFA with multi-LED (485 nm, 540 nm, 635 nm)
Filtersets for Fluorescein (long pass), Rhodamin (long pass) and GFP (short pass)
Phone: 12706
Upright fluorescence microscope with Imagesplitter ratiometric for Ca2+-imaging (AG Niehaus)
Inverted fluorescence microscope (IX81) for high-content screening (AG Niehaus)
Upright fluorescence microscope (AG Dietz)
Upright fluorescence microscope (AG Kaltschmidt)
Inverted fluorescence microscope (AG Dietz)
Polarization microscope (W01-236)
Key-References:
Eichenlaub-Ritter, U., Winterscheid, U., Vogt, E., Shen, Y., Tinneberg, H.R., Sorensen, R. (2007) 2-methoxyestradiol induces spindle aberrations, chromosome congression failure, and nondisjunction in mouse oocytes. Biol. Reprod. 76(5): 784-793
Shen, Y., Betzendahl, I., Sun, F., Tinneberg, H.R., Eichenlaub-Ritter, U. (2005) Non-invasive method to assess genotoxiity of nocodazole interfering with spindle formation in mammalian oocytes. Reprod. Toxicol. 19(4): 459-471
Advanced transmitted light inverted microscope (AG Kaltschmidt, AG Dietz)
Stereo microscope (AG Kaltschmidt)
Stereo microscope
Single-molecule localization microscopy (R2, 3. Etage)
Prof. Dr. Sven Thoms
Biochemie und Molekulare Medizin
Medizinische Fakultät OWL
Phone: 68502
Die Anschaffung des Mikroskops war möglich durch eine Sachspende der Marlies und Herbert Repkow Stiftung.
Omicron STM/AFM
Bruker AFMs (modified)
Prof. Dr. Angelika Kühnle
Physikalische Chemie I
Fakultät für Chemie
Phone: 2045
Referenzen:
https://pubs.acs.org/doi/10.1021/acs.jpcc.1c06213
https://doi.org/10.3762/bjnano.11.74
https://doi.org/10.1103/PhysRevB.100.205410
https://doi.org/10.1021/acs.langmuir.6b03814
https://doi.org/10.1063/1.4952954
Zeiss Helium Ion Microscope
Dr. André Beyer
Physik supramolekularer Systeme und Oberflächen, Fakultät für Physik
Phone: 5364
Prof. Dr. Thomas Hellweg
PC III, Faculty of Chemistry
Phone: 6888
Prof. Dr. Thomas Huser
Biomolecular Photonics, Faculty of Physics
Phone: 5450
Prof. Dr. Thomas Huser
Biomolecular Photonics, Faculty of Physics
Phone: 5450
Prof. Dr. Andreas Hütten
Thin Films and Physics of Nanostructures, Faculty of Physics
Phone: 5412
Prof. Dr. Karsten Niehaus
Proteome and Metabolome Research, Faculty of Biology
Phone: 5631
Dr. Thorsten Seidel
CF Microscopy and Imaging (under construction)
Phone: 5588
Field of research / key experience: Development of computational approaches to harvest bioimage data.
Keywords: Bioimage Informatics, Computer Vision, Machine Learning, Remote Sensing, Medical Image Analysis, Information Visualization
Available resource: Online image annotation platform BIIGLE (www.biigle.de) for manual and AI-assisted image / video annotation (development since 2009, > 4,000 users).
Prof. Tim W. Nattkemper (tim@biigle.de)
www.uni-bielefeld.de/fakultaeten/technische-fakultaet/arbeitsgruppen/biodata-mining
Faculty of Technology
Bielefeld University
References
BIIGLE 2.0 - Browsing and Annotating Large Marine Image Collections. Langenkämper D, Zurowietz M, Schoening T, Nattkemper TW. Frontiers in Marine Science, 4, 2017, 83, DOI=10.3389/fmars.2017.00083, ISSN=2296-7745
Current trends and future directions of large scale image and video annotation: Observations from four years of BIIGLE 2.0. M Zurowietz, TW Nattkemper, FRONTIERS IN MARINE SCIENCE (section Ocean Observation), 2021, Manuscript ID: 760036A, https://doi.org/10.3389/fmars.2021.760036